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CAZyme Information: MGYG000002888_00212

You are here: Home > Sequence: MGYG000002888_00212

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium kroppenstedtii_A
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium kroppenstedtii_A
CAZyme ID MGYG000002888_00212
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
537 MGYG000002888_2|CGC3 57230.13 5.6879
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002888 2480296 MAG United States North America
Gene Location Start: 116883;  End: 118496  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002888_00212.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 94 406 2.5e-49 0.9907407407407407

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18564 Glyco_hydro_5_C 1.29e-12 448 534 2 84
Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
pfam00150 Cellulase 1.61e-07 112 410 24 272
Cellulase (glycosyl hydrolase family 5).
pfam02449 Glyco_hydro_42 0.001 114 164 13 61
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP15591.1 0.0 52 537 1 486
QRQ65995.1 0.0 52 537 1 486
QRP10352.1 0.0 52 537 1 486
ACR18305.1 0.0 52 537 1 486
AYX81433.1 8.77e-265 40 537 8 507

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5CCU_A 2.02e-43 80 525 48 464
ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
5J14_A 1.00e-42 80 525 48 464
ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]
2OSW_A 4.48e-30 85 536 39 479
Endo-glycoceramidaseII from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
2OSX_A 2.05e-29 85 536 39 479
ChainA, Endoglycoceramidase II [Rhodococcus sp.]
2OSY_A 2.77e-29 85 536 39 479
ChainA, Endoglycoceramidase II [Rhodococcus sp.],2OSY_B Chain B, Endoglycoceramidase II [Rhodococcus sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A3S5YBC7 9.69e-43 80 525 40 456
Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1
Q6L6S1 2.74e-25 85 507 34 451
Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1
Q9GV16 6.38e-24 85 406 43 378
Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1
I1BTD7 3.61e-13 76 276 15 278
Glucosylceramidase OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=ERC1 PE=1 SV=1
H1AE12 7.76e-08 76 264 16 262
Glucosylceramidase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=EGC1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.701363 0.287070 0.004905 0.004307 0.001074 0.001271

TMHMM  Annotations      download full data without filtering help

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