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CAZyme Information: MGYG000002889_00235

You are here: Home > Sequence: MGYG000002889_00235

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea sp002920175
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea sp002920175
CAZyme ID MGYG000002889_00235
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 MGYG000002889_1|CGC3 43966.83 6.0755
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002889 4513078 MAG United States North America
Gene Location Start: 253177;  End: 254331  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002889_00235.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 48 343 2.4e-20 0.7785547785547785

CDD Domains      help

MGYG000002889_00235 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTC49306.1 2.05e-245 8 382 11 385
AYP23732.1 2.05e-245 8 382 11 385
AZI50615.1 2.05e-245 8 382 11 385
QAV49024.1 2.05e-245 8 382 11 385
QAV44184.1 2.05e-245 8 382 11 385

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002889_00235.