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CAZyme Information: MGYG000002889_02322

You are here: Home > Sequence: MGYG000002889_02322

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea sp002920175
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea sp002920175
CAZyme ID MGYG000002889_02322
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
155 MGYG000002889_18|CGC1 17373.06 9.4655
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002889 4513078 MAG United States North America
Gene Location Start: 55913;  End: 56380  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002889_02322.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 27 149 5.3e-21 0.8444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd13400 LT_IagB-like 2.24e-50 34 151 1 107
Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
PRK15328 PRK15328 4.65e-43 19 148 14 136
type III secretion system invasion protein IagB.
pfam01464 SLT 3.36e-27 27 146 1 110
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK13722 PRK13722 7.50e-23 26 151 22 142
lytic transglycosylase; Provisional
COG0741 MltE 1.04e-16 27 154 143 263
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QZY97801.1 3.38e-93 10 155 10 155
CBJ48261.1 7.31e-93 11 155 11 157
QIA54848.1 1.00e-92 1 155 1 156
AVF38208.1 1.34e-81 19 155 20 156
QIE99867.1 3.84e-81 22 155 23 156

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8X6H3 2.98e-46 22 151 24 153
Peptidoglycan-binding-like protein OS=Escherichia coli O157:H7 OX=83334 GN=pbl PE=3 SV=1
Q46790 3.70e-40 26 146 28 148
Putative peptidoglycan-binding-like protein OS=Escherichia coli (strain K12) OX=83333 GN=pbl PE=5 SV=2
P43018 1.50e-26 21 148 16 136
Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1
E1WAC2 2.12e-26 21 148 16 136
Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1
P0CL15 2.12e-26 21 148 16 136
Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000361 0.996457 0.002521 0.000222 0.000216 0.000197

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002889_02322.