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CAZyme Information: MGYG000002904_01593
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytobacter diazotrophicus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter; Phytobacter diazotrophicus | |||||||||||
| CAZyme ID | MGYG000002904_01593 | |||||||||||
| CAZy Family | GH24 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3715; End: 4161 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH24 | 27 | 136 | 4.7e-16 | 0.7956204379562044 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00735 | T4-like_lys | 8.24e-27 | 30 | 145 | 16 | 139 | bacteriophage T4-like lysozymes. Bacteriophage T4-like lysozymes hydrolyze the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) in peptidoglycan heteropolymers of prokaryotic cell walls. Members include a variety of bacteriophages (T4, RB49, RB69, Aeh1), as well as Dictyostelium. |
| PHA02596 | 5 | 5.25e-19 | 31 | 143 | 190 | 329 | baseplate hub subunit and tail lysozyme; Provisional |
| cd00737 | lyz_endolysin_autolysin | 4.36e-13 | 30 | 112 | 15 | 100 | endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
| cd16901 | lyz_P1 | 0.002 | 30 | 121 | 20 | 110 | P1 lysozyme Lyz-like proteins. Enterobacteria phage P1 lysozyme Lyz is secreted to the Escherichia coli periplasm where it is membrane bound and inactive. Activation involves the release from the membrane, an intramolecular thiol-disulfide isomerization and extensive structural rearrangement of the N-terminal region. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AUV08454.1 | 1.21e-103 | 1 | 148 | 1 | 148 |
| AUU91529.1 | 1.21e-103 | 1 | 148 | 1 | 148 |
| AUV09496.1 | 6.76e-101 | 1 | 148 | 1 | 148 |
| AUU90418.1 | 6.76e-101 | 1 | 148 | 1 | 148 |
| AFE59026.1 | 5.14e-64 | 1 | 148 | 1 | 148 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7RGR_A | 7.25e-12 | 27 | 142 | 18 | 154 | ChainA, Artificial protein L056 [synthetic construct],7RGR_B Chain B, Artificial protein L056 [synthetic construct] |
| 1QUG_A | 1.78e-11 | 31 | 142 | 18 | 150 | ChainA, PROTEIN (LYSOZYME) [Tequatrovirus T4] |
| 3FAD_A | 1.85e-11 | 31 | 142 | 18 | 150 | ChainA, Lysozyme [Tequatrovirus T4] |
| 1L59_A | 1.85e-11 | 31 | 142 | 18 | 150 | ChainA, LYSOZYME [Tequatrovirus T4] |
| 1SWY_A | 1.85e-11 | 31 | 142 | 18 | 150 | ChainA, Lysozyme [Tequatrovirus T4],1SWZ_A Chain A, Lysozyme [Tequatrovirus T4],1SX2_A Chain A, Lysozyme [Tequatrovirus T4],1SX7_A Chain A, Lysozyme [Tequatrovirus T4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q86AA1 | 1.12e-10 | 27 | 142 | 16 | 158 | Probable T4-type lysozyme 2 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274291 PE=2 SV=1 |
| P00720 | 1.97e-10 | 31 | 142 | 18 | 150 | Endolysin OS=Enterobacteria phage T4 OX=10665 GN=E PE=1 SV=2 |
| Q556F2 | 3.05e-10 | 27 | 142 | 16 | 158 | Probable T4-type lysozyme 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274831 PE=3 SV=1 |
| P16009 | 1.40e-09 | 31 | 137 | 191 | 323 | Pre-baseplate central spike protein Gp5 OS=Enterobacteria phage T4 OX=10665 GN=5 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000082 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |