Species | Phytobacter diazotrophicus | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter; Phytobacter diazotrophicus | |||||||||||
CAZyme ID | MGYG000002904_04760 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | Membrane-bound lytic murein transglycosylase D | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 7555; End: 8775 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH23 | 55 | 198 | 4.3e-22 | 0.9259259259259259 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK10783 | mltD | 0.0 | 1 | 406 | 50 | 456 | membrane-bound lytic murein transglycosylase D; Provisional |
cd16894 | MltD-like | 1.53e-59 | 63 | 193 | 1 | 129 | Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
pfam01464 | SLT | 2.16e-34 | 58 | 168 | 1 | 111 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
cd00254 | LT-like | 1.03e-18 | 78 | 190 | 10 | 108 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
COG0741 | MltE | 2.38e-16 | 11 | 210 | 54 | 296 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QOV69648.1 | 4.51e-292 | 1 | 406 | 50 | 455 |
QIH65123.1 | 4.51e-292 | 1 | 406 | 50 | 455 |
AUU89460.1 | 4.51e-292 | 1 | 406 | 50 | 455 |
QJF19283.1 | 4.51e-292 | 1 | 406 | 50 | 455 |
AUV05204.1 | 4.51e-292 | 1 | 406 | 50 | 455 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
1E0G_A | 5.85e-24 | 352 | 399 | 1 | 48 | LYSMDomain from E.coli MLTD [Escherichia coli] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P0AEZ8 | 6.55e-253 | 1 | 406 | 47 | 452 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1 |
P0AEZ7 | 6.55e-253 | 1 | 406 | 47 | 452 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1 |
P32820 | 4.73e-33 | 44 | 238 | 10 | 204 | Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1 |
P37710 | 5.08e-11 | 225 | 403 | 507 | 679 | Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2 |
Q49UX4 | 8.84e-11 | 296 | 401 | 87 | 198 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000083 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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