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CAZyme Information: MGYG000002925_01385
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-877 sp900548695 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-877; CAG-877 sp900548695 | |||||||||||
| CAZyme ID | MGYG000002925_01385 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | Peptidoglycan endopeptidase LytF | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20140; End: 20967 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM50 | 111 | 153 | 9.5e-16 | 0.975 |
| CBM50 | 164 | 206 | 1e-15 | 0.975 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 3.09e-42 | 27 | 273 | 306 | 592 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 3.08e-27 | 2 | 152 | 406 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK10783 | mltD | 1.22e-18 | 30 | 160 | 320 | 454 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK10783 | mltD | 2.09e-18 | 142 | 267 | 320 | 441 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK10783 | mltD | 1.62e-15 | 3 | 101 | 345 | 452 | membrane-bound lytic murein transglycosylase D; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASR40346.1 | 1.53e-35 | 3 | 272 | 396 | 637 |
| AFN75823.1 | 1.02e-34 | 4 | 272 | 685 | 916 |
| QHS24286.1 | 5.36e-34 | 3 | 272 | 100 | 370 |
| AFM05029.1 | 6.76e-34 | 1 | 274 | 1 | 256 |
| QER42489.1 | 9.41e-34 | 4 | 272 | 60 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4UZ2_A | 2.72e-09 | 164 | 209 | 5 | 50 | Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8] |
| 4XCM_A | 1.59e-07 | 164 | 209 | 5 | 50 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 5JCD_A | 9.47e-06 | 99 | 206 | 73 | 192 | Crystalstructure of OsCEBiP [Oryza sativa Japonica Group],5JCD_B Crystal structure of OsCEBiP [Oryza sativa Japonica Group],5JCD_C Crystal structure of OsCEBiP [Oryza sativa Japonica Group] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 5.76e-28 | 113 | 273 | 30 | 193 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q5HRU2 | 4.90e-27 | 111 | 272 | 29 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
| Q8CMN2 | 4.90e-27 | 111 | 272 | 29 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1 |
| O07532 | 1.08e-24 | 4 | 268 | 94 | 346 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| Q49UX4 | 5.08e-24 | 111 | 272 | 29 | 193 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000066 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |