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CAZyme Information: MGYG000002937_01657

You are here: Home > Sequence: MGYG000002937_01657

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporolactobacillus sp900543345
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_G; Sporolactobacillaceae; Sporolactobacillus; Sporolactobacillus sp900543345
CAZyme ID MGYG000002937_01657
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
719 MGYG000002937_128|CGC1 76987.73 10.4331
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002937 2947302 MAG Russia Europe
Gene Location Start: 4034;  End: 6193  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002937_01657.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 6 261 1.7e-35 0.4425925925925926

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 4.41e-46 35 512 37 441
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 4.35e-31 64 222 1 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1287 Stt3 1.90e-05 35 173 55 207
Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones].
pfam02366 PMT 3.16e-05 48 226 38 236
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
PRK13279 arnT 7.96e-05 65 226 62 227
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHU89858.1 8.07e-69 4 686 269 884
QHU90800.1 3.57e-64 1 686 270 881
QUB37647.1 4.13e-62 6 691 203 780
QJU05422.1 4.91e-61 27 686 291 885
QJU08762.1 2.43e-60 1 686 269 890

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34575 1.43e-137 1 706 1 679
Putative mannosyltransferase YkcB OS=Bacillus subtilis (strain 168) OX=224308 GN=ykcB PE=3 SV=2
P37483 2.54e-136 6 717 4 682
Putative mannosyltransferase YycA OS=Bacillus subtilis (strain 168) OX=224308 GN=yycA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999857 0.000005 0.000004 0.000000 0.000000 0.000163

TMHMM  Annotations      download full data without filtering help

start end
10 27
81 103
113 132
139 156
171 193
205 226
335 352
365 387
392 411
423 442
446 468
475 497