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CAZyme Information: MGYG000002950.1_00305

You are here: Home > Sequence: MGYG000002950.1_00305

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Leptotrichia wadei
Lineage Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia wadei
CAZyme ID MGYG000002950.1_00305
CAZy Family GH135
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
364 41548.61 4.5825
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002950.1 1471153 MAG United States North America
Gene Location Start: 19;  End: 1113  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002950.1_00305.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH135 39 232 1.6e-29 0.8481012658227848

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12138 Spherulin4 4.67e-22 40 205 26 200
Spherulation-specific family 4. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBM49115.1 1.53e-263 1 364 74 437
BBM46892.1 4.60e-249 18 364 16 362
BBM55577.1 3.01e-195 1 364 80 443
BBM39370.1 3.19e-166 1 364 43 413
BBM53111.1 5.33e-153 1 364 81 452

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000024 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002950.1_00305.