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CAZyme Information: MGYG000002970_00169

You are here: Home > Sequence: MGYG000002970_00169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900552755
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900552755
CAZyme ID MGYG000002970_00169
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 MGYG000002970_4|CGC1 53120.05 5.7848
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002970 1986738 MAG United States North America
Gene Location Start: 11321;  End: 12739  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002970_00169.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 52 431 6.2e-86 0.8810679611650486

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 8.20e-80 54 374 10 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54527.1 0.0 36 472 1 437
AZH70520.1 1.06e-312 36 472 1 437
QWT17210.1 3.44e-202 36 468 1 435
AEB07692.1 8.74e-194 36 470 1 456
QRT29801.1 9.00e-150 38 468 1 422

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000018 0.000046 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002970_00169.