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CAZyme Information: MGYG000003016_02396

You are here: Home > Sequence: MGYG000003016_02396

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Salinicola tamaricis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Halomonadaceae; Salinicola; Salinicola tamaricis
CAZyme ID MGYG000003016_02396
CAZy Family AA6
CAZyme Description p-benzoquinone reductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
201 20977.5 4.9696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003016 3944563 MAG China Asia
Gene Location Start: 1095;  End: 1700  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003016_02396.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA6 3 198 4.7e-84 0.9948717948717949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK03767 PRK03767 4.46e-134 1 201 1 200
NAD(P)H:quinone oxidoreductase; Provisional
TIGR01755 flav_wrbA 3.90e-107 3 199 2 197
NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR (SP:P03032) are not detected. [Energy metabolism, Electron transport]
COG0655 WrbA 8.85e-58 1 199 3 205
Multimeric flavodoxin WrbA [Energy production and conversion].
pfam03358 FMN_red 1.06e-10 3 146 2 143
NADPH-dependent FMN reductase.
pfam00258 Flavodoxin_1 1.98e-09 6 138 1 141
Flavodoxin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SPT16511.1 3.92e-56 2 199 3 201
QNG14303.1 1.54e-55 1 199 1 200
QHS66605.1 1.54e-55 1 199 1 200
BAM82206.1 4.10e-55 3 200 4 201
CAD1841148.1 4.23e-55 2 201 3 201

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4LA4_A 6.10e-91 2 200 3 204
Crystalstructure of native PnpB [Pseudomonas sp. WBC-3],4LA4_B Crystal structure of native PnpB [Pseudomonas sp. WBC-3],4LAF_A Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_B Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_C Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_D Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3]
2R96_A 9.35e-79 1 201 1 198
Crystalstructure of E. coli WrbA in complex with FMN [Escherichia coli],2R96_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_A Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2RG1_A Crystal structure of E. coli WrbA apoprotein [Escherichia coli],2RG1_B Crystal structure of E. coli WrbA apoprotein [Escherichia coli],3B6I_A WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6I_B WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6J_A WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6J_B WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6K_A WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6K_B WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6M_A WrbA from Escherichia coli, second crystal form [Escherichia coli K-12],3B6M_B WrbA from Escherichia coli, second crystal form [Escherichia coli K-12]
4DY4_A 5.20e-78 2 201 1 197
Highresolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1],4DY4_C High resolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1]
3ZHO_A 5.20e-78 2 201 1 197
X-raystructure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],3ZHO_B X-ray structure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],4YQE_A Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],4YQE_B Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],5F12_A WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12],5F12_B WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12]
5F4B_A 1.27e-72 1 201 4 202
Structureof B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308],5F4B_B Structure of B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1QYF4 2.05e-115 1 201 1 201
NAD(P)H dehydrogenase (quinone) OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=Csal_1148 PE=3 SV=1
B2T8L2 4.12e-101 1 201 1 200
NAD(P)H dehydrogenase (quinone) OS=Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) OX=398527 GN=Bphyt_6351 PE=3 SV=1
A9AT43 1.18e-100 1 200 1 199
NAD(P)H dehydrogenase (quinone) OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_6057 PE=3 SV=1
Q0A961 3.26e-100 1 201 1 199
NAD(P)H dehydrogenase (quinone) OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=Mlg_1277 PE=3 SV=1
A0KCF0 6.80e-100 1 200 1 199
NAD(P)H dehydrogenase (quinone) OS=Burkholderia cenocepacia (strain HI2424) OX=331272 GN=Bcen2424_6131 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000049 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003016_02396.