dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003065_00749

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Species

Ruminococcus_B sp900544395

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Ruminococcus_B; Ruminococcus_B sp900544395

CAZyme ID

MGYG000003065_00749

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1944	MGYG000003065_6\|CGC4	210948.99	4.4406

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003065	2628797	MAG	United States	North America

Gene Location

Start: 82455; End: 88289 Strand: +

No EC number prediction in MGYG000003065_00749.

Family	Start	End	Evalue	family coverage
GH29	48	420	1.2e-58	0.9017341040462428

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3669	AfuC	3.20e-62	59	557	11	430	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
smart00812	Alpha_L_fucos	1.24e-25	66	417	23	328	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
pfam01120	Alpha_L_fucos	1.69e-20	91	417	72	326	Alpha-L-fucosidase.
PTZ00121	PTZ00121	1.75e-08	1264	1666	1307	1692	MAEBL; Provisional
PRK05035	PRK05035	5.80e-08	1273	1484	465	685	electron transport complex protein RnfC; Provisional

Hit ID	Query Start	Query End	Hit Start	Hit End
QHB23055.1	2	1944	9	1773
QEI30547.1	2	1944	9	1773
QRT29448.1	2	1944	9	1774
PLT74914.1	2	1944	9	1773
QPK81604.1	1	1025	1	1001

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6TR3_A	3.23e-310	35	606	4	552	Ruminococcusgnavus GH29 fucosidase E1_10125 in complex with fucose [[Ruminococcus] gnavus E1]
6TR4_A	5.03e-309	35	606	4	552	Ruminococcusgnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1],6TR4_B Ruminococcus gnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1]
6ORG_A	5.90e-96	58	559	10	450	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	6.70e-95	58	559	10	450	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A	6.91e-95	58	559	10	450	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	1.31e-83	58	557	37	477	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	2.95e-75	58	580	39	506	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
P0DTR5	1.13e-08	566	695	701	829	A type blood alpha-D-galactosamine galactosaminidase OS=Flavonifractor plautii OX=292800 PE=1 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000444	0.998589	0.000401	0.000210	0.000175	0.000151

start	end
12	34
1921	1940