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CAZyme Information: MGYG000003097_00490
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola sp000436795 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000436795 | |||||||||||
| CAZyme ID | MGYG000003097_00490 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 147665; End: 149164 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 84 | 268 | 4.5e-77 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 6.50e-10 | 8 | 268 | 5 | 273 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 1.15e-08 | 119 | 268 | 34 | 186 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 0.003 | 119 | 247 | 55 | 190 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| pfam18884 | TSP3_bac | 0.006 | 453 | 474 | 1 | 22 | Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT93111.1 | 3.35e-244 | 30 | 499 | 42 | 512 |
| ALJ61309.1 | 3.87e-244 | 30 | 499 | 46 | 516 |
| QDO69223.1 | 4.75e-244 | 4 | 495 | 12 | 508 |
| QUT77823.1 | 8.64e-241 | 28 | 495 | 48 | 512 |
| QUT75603.1 | 8.24e-238 | 12 | 495 | 2 | 482 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8NQQ7 | 9.35e-46 | 31 | 495 | 20 | 411 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q2UB83 | 6.64e-44 | 31 | 495 | 20 | 411 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| Q5B297 | 1.33e-43 | 31 | 495 | 20 | 408 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 2.41e-42 | 31 | 495 | 20 | 411 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| B0XMA2 | 4.61e-41 | 3 | 495 | 1 | 412 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000228 | 0.999083 | 0.000185 | 0.000179 | 0.000163 | 0.000147 |