logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003113_01860

You are here: Home > Sequence: MGYG000003113_01860

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pauljensenia sp001838165
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Pauljensenia; Pauljensenia sp001838165
CAZyme ID MGYG000003113_01860
CAZy Family GH111
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1232 MGYG000003113_27|CGC1 133440.02 4.5436
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003113 2324284 MAG United States North America
Gene Location Start: 11048;  End: 14746  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003113_01860.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH111 199 1012 0 0.7897286821705426

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033930 pneumo_PspA 5.62e-58 1025 1229 428 620
pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
NF033838 PspC_subgroup_1 9.66e-54 1047 1229 484 643
pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
COG5263 COG5263 5.96e-44 1052 1229 83 293
Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism].
NF033840 PspC_relate_1 2.44e-41 1092 1231 511 647
PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC.
NF033930 pneumo_PspA 5.35e-41 1059 1211 492 643
pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT36061.1 0.0 1 1100 1 1106
EDN79875.1 0.0 1 1127 1 1131
QGS10508.1 0.0 1 1127 1 1127
AKU64455.1 0.0 1 1126 1 1112
QQC43335.1 0.0 1 1126 1 1112

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000276 0.998983 0.000164 0.000217 0.000171 0.000149

TMHMM  Annotations      download full data without filtering help

start end
7 29