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CAZyme Information: MGYG000003121_00733
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gemella sp002871655 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Staphylococcales; Gemellaceae; Gemella; Gemella sp002871655 | |||||||||||
| CAZyme ID | MGYG000003121_00733 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 41785; End: 42858 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13914 | PRK13914 | 1.02e-18 | 1 | 332 | 1 | 455 | invasion associated endopeptidase. |
| PRK06347 | PRK06347 | 3.50e-15 | 26 | 172 | 404 | 569 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 7.86e-15 | 25 | 176 | 328 | 505 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam00877 | NLPC_P60 | 3.85e-14 | 268 | 332 | 15 | 79 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| cd00118 | LysM | 6.27e-14 | 86 | 129 | 2 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEI39452.1 | 2.86e-157 | 1 | 357 | 1 | 370 |
| AXI26353.1 | 3.96e-149 | 1 | 357 | 1 | 336 |
| AME08782.1 | 3.07e-144 | 1 | 357 | 1 | 308 |
| SQH56165.1 | 4.13e-142 | 1 | 357 | 1 | 328 |
| QGS08598.1 | 8.95e-141 | 1 | 357 | 1 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4B8V_A | 2.31e-07 | 30 | 129 | 44 | 160 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O34669 | 2.15e-15 | 25 | 135 | 23 | 127 | Cell wall-binding protein YocH OS=Bacillus subtilis (strain 168) OX=224308 GN=yocH PE=1 SV=1 |
| Q8CMN2 | 5.50e-13 | 30 | 129 | 86 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1 |
| Q5HRU2 | 5.50e-13 | 30 | 129 | 86 | 190 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
| P54421 | 8.00e-13 | 3 | 128 | 2 | 128 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| P39046 | 1.01e-12 | 30 | 131 | 565 | 666 | Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000226 | 0.999070 | 0.000177 | 0.000173 | 0.000171 | 0.000149 |