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CAZyme Information: MGYG000003133_01766
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Niallia sp900199695 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-18226; Niallia; Niallia sp900199695 | |||||||||||
| CAZyme ID | MGYG000003133_01766 | |||||||||||
| CAZy Family | GT0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 52722; End: 55340 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR02794 | tolA_full | 2.26e-25 | 94 | 224 | 84 | 209 | TolA protein. TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis] |
| PRK09510 | tolA | 1.88e-24 | 94 | 224 | 87 | 229 | cell envelope integrity inner membrane protein TolA; Provisional |
| PRK09510 | tolA | 9.23e-24 | 96 | 224 | 120 | 245 | cell envelope integrity inner membrane protein TolA; Provisional |
| TIGR02794 | tolA_full | 2.10e-23 | 96 | 220 | 106 | 233 | TolA protein. TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis] |
| PRK09510 | tolA | 5.53e-23 | 17 | 224 | 5 | 215 | cell envelope integrity inner membrane protein TolA; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QJX61468.1 | 0.0 | 1 | 872 | 1 | 1042 |
| QKH60623.1 | 0.0 | 231 | 872 | 615 | 1256 |
| QWG31434.1 | 8.03e-235 | 243 | 849 | 51 | 656 |
| AKE17841.1 | 5.96e-233 | 244 | 871 | 55 | 685 |
| QBZ26486.1 | 5.96e-233 | 244 | 871 | 55 | 685 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O31542 | 1.64e-48 | 567 | 856 | 7 | 294 | Uncharacterized protein YfnD OS=Bacillus subtilis (strain 168) OX=224308 GN=yfnD PE=4 SV=1 |
| O06484 | 4.75e-43 | 568 | 813 | 7 | 256 | Uncharacterized protein YfnF OS=Bacillus subtilis (strain 168) OX=224308 GN=yfnF PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000044 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |