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CAZyme Information: MGYG000003137_05143

You are here: Home > Sequence: MGYG000003137_05143

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bradyrhizobium sp000015165
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Bradyrhizobium; Bradyrhizobium sp000015165
CAZyme ID MGYG000003137_05143
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
509 MGYG000003137_27|CGC1 56498.37 9.6698
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003137 8388709 MAG United States North America
Gene Location Start: 57188;  End: 58717  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003137_05143.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 12 388 4.1e-46 0.6814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13231 PMT_2 8.80e-39 42 203 1 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1807 ArnT 9.95e-21 25 364 46 385
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
PRK13279 arnT 2.35e-05 49 199 68 222
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPF88307.1 5.84e-258 9 508 1 506
QPF82639.1 2.05e-46 3 490 13 498
BCT68390.1 4.82e-41 5 358 401 742
QPB22219.1 4.25e-40 12 418 401 808
QJP15702.1 8.19e-39 5 382 389 770

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1MLH5 3.03e-17 5 397 9 403
Lipid A galacturonosyltransferase RgtD OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=rgtD PE=3 SV=1
C5BDQ8 4.23e-07 30 359 48 373
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=arnT PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.816591 0.182535 0.000241 0.000233 0.000161 0.000234

TMHMM  Annotations      download full data without filtering help

start end
62 84
94 111
118 137
152 174
181 203
233 255
267 284
294 316
328 350