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CAZyme Information: MGYG000003143_01312

You are here: Home > Sequence: MGYG000003143_01312

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_J sp900548455
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_J; Clostridium_J sp900548455
CAZyme ID MGYG000003143_01312
CAZy Family GT4
CAZyme Description Ubiquinone biosynthesis O-methyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1138 131366.79 4.7923
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003143 3911084 MAG United States North America
Gene Location Start: 81838;  End: 85254  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003143_01312.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08241 Methyltransf_11 7.43e-21 615 710 1 94
Methyltransferase domain. Members of this family are SAM dependent methyltransferases.
pfam13649 Methyltransf_25 8.32e-19 614 706 1 97
Methyltransferase domain. This family appears to be a methyltransferase domain.
cd03801 GT4_PimA-like 1.12e-18 221 376 139 295
phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
cd03811 GT4_GT28_WabH-like 2.28e-17 195 376 103 290
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
COG0438 RfaB 3.81e-16 190 440 118 381
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUN37879.1 2.01e-277 9 772 5 767
AJE09570.1 7.68e-229 9 772 11 1086
ACQ54354.1 7.68e-229 9 772 11 1086
APR01690.1 7.68e-229 9 772 11 1086
AXG93706.1 7.68e-229 9 772 11 1086

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VE3_A 4.93e-12 606 744 34 181
Crystalstructure of PH0226 protein from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii],1VE3_B Crystal structure of PH0226 protein from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii]
3L8D_A 3.55e-08 593 711 38 152
Crystalstructure of methyltransferase from Bacillus Thuringiensis [Bacillus thuringiensis str. Al Hakam]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003143_01312.