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CAZyme Information: MGYG000003192_02051
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA5416 sp900539175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA5416; UBA5416 sp900539175 | |||||||||||
| CAZyme ID | MGYG000003192_02051 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 10599; End: 14180 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 425 | 592 | 4.7e-16 | 0.8776595744680851 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam05426 | Alginate_lyase | 5.10e-15 | 116 | 325 | 57 | 272 | Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold. |
| pfam14200 | RicinB_lectin_2 | 9.97e-14 | 460 | 544 | 5 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam13385 | Laminin_G_3 | 4.93e-10 | 616 | 778 | 1 | 150 | Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily. |
| NF033190 | inl_like_NEAT_1 | 9.44e-10 | 903 | 1169 | 510 | 734 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam14200 | RicinB_lectin_2 | 1.24e-09 | 504 | 557 | 2 | 55 | Ricin-type beta-trefoil lectin domain-like. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDA29257.1 | 4.77e-153 | 12 | 558 | 3 | 555 |
| AHM66085.1 | 3.65e-152 | 37 | 558 | 28 | 555 |
| AIY11542.1 | 3.65e-152 | 37 | 558 | 28 | 555 |
| QPK60353.1 | 3.41e-148 | 12 | 558 | 3 | 555 |
| QPK55271.1 | 3.41e-148 | 12 | 558 | 3 | 555 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P19424 | 1.71e-12 | 1010 | 1184 | 40 | 210 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
| P38535 | 1.84e-10 | 1035 | 1189 | 931 | 1082 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| Q06852 | 7.21e-07 | 1033 | 1189 | 2104 | 2265 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
| Q06853 | 9.20e-07 | 1023 | 1186 | 478 | 636 | Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002619 | 0.627447 | 0.355038 | 0.011595 | 0.002806 | 0.000475 |