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CAZyme Information: MGYG000003208_05651

You are here: Home > Sequence: MGYG000003208_05651

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E extremaustralis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E extremaustralis
CAZyme ID MGYG000003208_05651
CAZy Family GT73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 MGYG000003208_96|CGC2 30485.93 7.6997
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003208 6254364 MAG United States North America
Gene Location Start: 70305;  End: 71126  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003208_05651.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT73 157 264 1.8e-43 0.43673469387755104

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09822 PRK09822 3.48e-22 33 271 18 263
lipopolysaccharide core biosynthesis protein; Provisional
pfam01973 MAF_flag10 2.33e-04 39 199 28 166
Protein of unknown function DUF115. This family of archaebacterial proteins has no known function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SDE74303.1 2.00e-200 1 273 1 273
AZP73584.1 1.45e-139 25 270 1 246
AYF49846.1 7.90e-136 1 272 1 283
QXH82112.1 3.21e-135 1 271 1 282
QTV20349.1 1.53e-134 25 272 1 248

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27241 5.83e-19 33 269 18 261
Lipopolysaccharide core biosynthesis protein RfaZ OS=Escherichia coli (strain K12) OX=83333 GN=rfaZ PE=4 SV=2
P26473 2.38e-18 41 268 26 260
Lipopolysaccharide core biosynthesis protein RfaZ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaZ PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003208_05651.