dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000003215_01349

You are here: Home > Sequence: MGYG000003215_01349

Basic Information help

Species

1XD42-69 sp014287635

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; 1XD42-69; 1XD42-69 sp014287635

CAZyme ID

MGYG000003215_01349

CAZy Family

GH2

CAZyme Description

Beta-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1020	MGYG000003215_163\|CGC1	117321.81	5.0347

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003215	2655157	MAG	United States	North America

Gene Location

Start: 13775; End: 16837 Strand: +

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.23

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	38	904	2.4e-216	0.9654255319148937

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK09525	lacZ	0.0	12	1018	20	1027	beta-galactosidase.
PRK10340	ebgA	0.0	17	1016	12	998	cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250	LacZ	4.73e-158	40	907	9	808	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836	Glyco_hydro_2_C	9.69e-111	319	616	1	302	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038	Bgal_small_N	7.33e-104	736	1017	1	272	Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
ATP00898.1	1	1020	1	1027
QIA43382.1	1	1020	1	1027
ATL91113.1	1	1020	1	1027
AXB28367.1	1	1020	1	1027
CBL02867.1	1	1020	1	1027

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6S6Z_A	1.29e-214	10	1018	5	980	Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A	1.33e-214	10	1018	6	981	Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A	6.15e-154	18	1016	16	993	ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A	1.24e-151	18	1016	19	997	Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3T2O_A	1.21e-145	10	1009	46	1042	E.coli (lacZ) beta-galactosidase (S796D) [Escherichia coli K-12],3T2O_B E. coli (lacZ) beta-galactosidase (S796D) [Escherichia coli K-12],3T2O_C E. coli (lacZ) beta-galactosidase (S796D) [Escherichia coli K-12],3T2O_D E. coli (lacZ) beta-galactosidase (S796D) [Escherichia coli K-12],3T2P_A E. coli (lacZ) beta-galactosidase (S796D) in complex with IPTG [Escherichia coli K-12],3T2P_B E. coli (lacZ) beta-galactosidase (S796D) in complex with IPTG [Escherichia coli K-12],3T2P_C E. coli (lacZ) beta-galactosidase (S796D) in complex with IPTG [Escherichia coli K-12],3T2P_D E. coli (lacZ) beta-galactosidase (S796D) in complex with IPTG [Escherichia coli K-12],3T2Q_A E. coli (lacZ) beta-galactosidase (S796D) in complex with galactonolactone [Escherichia coli K-12],3T2Q_B E. coli (lacZ) beta-galactosidase (S796D) in complex with galactonolactone [Escherichia coli K-12],3T2Q_C E. coli (lacZ) beta-galactosidase (S796D) in complex with galactonolactone [Escherichia coli K-12],3T2Q_D E. coli (lacZ) beta-galactosidase (S796D) in complex with galactonolactone [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9K9C6	0.0	7	1020	8	1014	Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
P23989	5.65e-286	9	1020	11	1025	Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1
P24131	2.13e-279	9	910	11	895	Beta-galactosidase OS=Clostridium acetobutylicum OX=1488 GN=cbgA PE=2 SV=2
O52847	4.92e-278	11	1020	23	1034	Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q1G9Z4	1.03e-264	3	1020	13	1005	Beta-galactosidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / BCRC 10696 / JCM 1002 / NBRC 13953 / NCIMB 11778 / NCTC 12712 / WDCM 00102 / Lb 14) OX=390333 GN=lacZ PE=3 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000052	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000003215_01349.