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CAZyme Information: MGYG000003221_02160

You are here: Home > Sequence: MGYG000003221_02160

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species OM05-12 sp900760755
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; OM05-12; OM05-12 sp900760755
CAZyme ID MGYG000003221_02160
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
797 86090.28 6.0996
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003221 3509168 MAG United States North America
Gene Location Start: 104989;  End: 107382  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003221_02160.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 262 8.4e-79 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.93e-06 4 379 10 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.55e-04 77 254 3 175
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77068.1 2.27e-259 5 490 10 493
ALJ58404.1 5.64e-256 11 509 12 513
QUT90477.1 6.48e-255 11 489 12 493
QDO71075.1 3.52e-241 5 492 6 504
QNL41084.1 1.36e-192 24 475 58 521

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 3.08e-48 24 472 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.22e-45 24 472 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 1.63e-45 24 472 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 2.01e-44 24 472 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q2UB83 2.69e-44 24 472 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.999080 0.000180 0.000155 0.000154 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003221_02160.