logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003277_01261

You are here: Home > Sequence: MGYG000003277_01261

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Duncaniella sp900762315
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp900762315
CAZyme ID MGYG000003277_01261
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
632 71063.13 6.5033
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003277 3767547 MAG United States North America
Gene Location Start: 12314;  End: 14212  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.185

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 48 553 4.2e-200 0.9980119284294234

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 0.0 48 553 1 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 2.22e-108 90 557 44 505
Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SCV09028.1 0.0 2 630 5 639
ALJ44695.1 0.0 2 630 5 639
QRQ56375.1 0.0 2 630 3 637
QUT28595.1 0.0 2 630 3 637
QUT82455.1 0.0 2 630 3 640

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 2.91e-117 44 628 28 648
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 4.12e-112 44 628 28 648
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
4QJY_A 6.81e-18 240 560 201 567
Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A 7.40e-18 343 529 381 579
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QK0_A 3.40e-16 240 560 201 567
Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002381 0.994156 0.002642 0.000316 0.000248 0.000224

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003277_01261.