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CAZyme Information: MGYG000003306_00369

You are here: Home > Sequence: MGYG000003306_00369

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-448 sp003150135
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; CAG-448; CAG-448 sp003150135
CAZyme ID MGYG000003306_00369
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
995 109443.19 4.817
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003306 2266147 MAG China Asia
Gene Location Start: 225787;  End: 228774  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003306_00369.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 540 826 2.5e-16 0.563076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.94e-19 450 722 51 321
Polygalacturonase [Carbohydrate transport and metabolism].
pfam12708 Pectate_lyase_3 8.85e-08 479 546 2 58
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23464.1 1.14e-130 197 978 62 793
QCD41820.1 4.32e-84 259 919 255 875
ADB48561.1 1.87e-41 465 931 16 445
ADB48560.1 2.34e-36 480 978 29 497
ADB49825.1 7.24e-30 480 925 28 445

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 6.20e-09 472 609 38 153
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003306_00369.