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CAZyme Information: MGYG000003313_01344

You are here: Home > Sequence: MGYG000003313_01344

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAMM01 sp900552945
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; QAMM01; QAMM01 sp900552945
CAZyme ID MGYG000003313_01344
CAZy Family GH30
CAZyme Description Glucuronoxylanase XynC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
448 MGYG000003313_59|CGC1 49745.14 4.7875
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003313 2159275 MAG Estonia Europe
Gene Location Start: 1701;  End: 3047  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003313_01344.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 4 442 9.2e-91 0.9616306954436451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5520 XynC 1.05e-43 5 441 35 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam14587 Glyco_hydr_30_2 9.28e-25 8 325 6 367
O-Glycosyl hydrolase family 30.
pfam02057 Glyco_hydro_59 2.05e-21 18 314 2 255
Glycosyl hydrolase family 59.
pfam02055 Glyco_hydro_30 3.30e-12 88 275 70 267
Glycosyl hydrolase family 30 TIM-barrel domain.
pfam17189 Glyco_hydro_30C 3.61e-07 352 395 1 44
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV68404.1 8.40e-96 4 445 30 460
QNU65467.1 9.21e-94 4 445 30 460
AEY65936.1 7.25e-90 4 445 30 460
ACL75030.1 1.12e-88 4 445 30 460
QGQ97720.1 1.09e-86 7 444 57 484

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1NOF_A 5.69e-41 37 443 27 383
ChainA, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi]
6IUJ_A 5.76e-40 8 445 26 474
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
6KRL_A 1.14e-39 2 445 93 545
Crystalstructure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
7O0E_A 5.14e-38 4 384 3 386
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
5CXP_A 6.31e-38 1 444 1 389
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 6.02e-38 4 384 27 410
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q45070 5.63e-20 4 441 34 419
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
Q6YK37 6.14e-19 100 443 103 422
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
Q9UB00 9.96e-19 3 385 85 484
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2
P17439 1.16e-09 111 403 194 498
Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000028 0.000006 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003313_01344.