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CAZyme Information: MGYG000003337_01734
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_C sp900765125 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900765125 | |||||||||||
| CAZyme ID | MGYG000003337_01734 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 11; End: 3025 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 339 | 880 | 2.9e-104 | 0.9904306220095693 |
| CBM4 | 27 | 201 | 7.3e-20 | 0.9603174603174603 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 2.66e-61 | 346 | 880 | 6 | 373 | Glycosyl hydrolase family 9. |
| pfam02927 | CelD_N | 1.16e-20 | 246 | 329 | 3 | 83 | Cellulase N-terminal ig-like domain. |
| cd02850 | E_set_Cellulase_N | 1.68e-20 | 246 | 334 | 2 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
| cd14256 | Dockerin_I | 4.54e-13 | 936 | 992 | 1 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| pfam02018 | CBM_4_9 | 3.68e-06 | 28 | 201 | 7 | 131 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL17684.1 | 3.81e-270 | 3 | 957 | 19 | 914 |
| BAH56283.1 | 2.77e-231 | 25 | 885 | 176 | 1007 |
| ADU21576.1 | 1.78e-220 | 17 | 883 | 26 | 798 |
| AAR01216.1 | 3.56e-202 | 12 | 888 | 19 | 902 |
| CAS03458.1 | 7.94e-202 | 12 | 888 | 23 | 906 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1UT9_A | 1.34e-134 | 246 | 885 | 7 | 605 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 1RQ5_A | 3.83e-134 | 246 | 887 | 7 | 607 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 6DHT_A | 1.12e-57 | 246 | 885 | 18 | 565 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 3X17_A | 2.68e-46 | 246 | 882 | 18 | 554 | Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium] |
| 4CJ0_A | 4.72e-43 | 225 | 961 | 10 | 584 | ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C2S1 | 3.36e-156 | 30 | 958 | 48 | 854 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| A3DCH1 | 9.28e-156 | 30 | 958 | 48 | 854 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| Q05156 | 3.04e-116 | 37 | 887 | 46 | 745 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P14090 | 7.11e-110 | 25 | 887 | 185 | 910 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
| P10476 | 2.16e-100 | 248 | 892 | 39 | 606 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000715 | 0.998268 | 0.000213 | 0.000333 | 0.000235 | 0.000210 |