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CAZyme Information: MGYG000003358_04626

You are here: Home > Sequence: MGYG000003358_04626

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kluyvera ascorbata
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera ascorbata
CAZyme ID MGYG000003358_04626
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
584 63427.47 4.3674
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003358 4968008 MAG United States North America
Gene Location Start: 19416;  End: 21170  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003358_04626.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 83 341 2e-75 0.9956709956709957
CBM73 532 582 6.3e-21 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 4.50e-73 91 341 1 224
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 1.46e-36 107 336 25 229
Chitinase class I.
COG3979 COG3979 1.64e-33 30 225 7 181
Chitodextrinase [Carbohydrate transport and metabolism].
PRK13211 PRK13211 2.33e-11 456 584 337 477
N-acetylglucosamine-binding protein GbpA.
smart00495 ChtBD3 0.001 529 554 1 26
Chitin-binding domain type 3.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBV67492.1 0.0 1 584 1 584
QIR28773.1 0.0 1 584 1 589
VDZ84702.1 0.0 1 584 1 595
ASG89464.1 0.0 1 584 1 589
QJY68925.1 0.0 1 584 1 587

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V92_A 4.16e-33 107 350 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa]
2BAA_A 7.46e-33 87 347 2 242
TheRefined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution [Hordeum vulgare]
7V91_A 7.85e-33 107 350 29 245
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]
4DWX_A 1.98e-32 87 347 3 243
CrystalStructure of a Family GH-19 Chitinase from rye seeds [Secale cereale],4DWX_B Crystal Structure of a Family GH-19 Chitinase from rye seeds [Secale cereale],4DYG_A Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4 [Secale cereale],4DYG_B Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4 [Secale cereale]
1CNS_A 9.42e-32 87 347 2 242
CrystalStructure Of Chitinase At 1.91a Resolution [Hordeum vulgare],1CNS_B Crystal Structure Of Chitinase At 1.91a Resolution [Hordeum vulgare]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P52404 2.50e-36 107 350 94 310
Endochitinase 2 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB2 PE=2 SV=1
P52403 6.82e-36 107 350 96 312
Endochitinase 1 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB1 PE=2 SV=1
P52405 2.44e-35 107 350 96 312
Endochitinase 3 (Fragment) OS=Solanum tuberosum OX=4113 GN=CHTB3 PE=2 SV=1
P24091 2.57e-34 89 350 77 318
Endochitinase B OS=Nicotiana tabacum OX=4097 GN=CHN50 PE=1 SV=1
Q05538 3.38e-34 107 350 100 316
Basic 30 kDa endochitinase OS=Solanum lycopersicum OX=4081 GN=CHI9 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000268 0.999075 0.000167 0.000175 0.000154 0.000136

TMHMM  Annotations      download full data without filtering help

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7 29