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CAZyme Information: MGYG000003367_00075

You are here: Home > Sequence: MGYG000003367_00075

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp007896885
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp007896885
CAZyme ID MGYG000003367_00075
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
433 48659.74 8.3687
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003367 3747359 MAG United States North America
Gene Location Start: 31895;  End: 33196  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 74 413 9e-63 0.92

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.27e-46 35 419 69 464
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 5.84e-19 121 316 33 209
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 3.63e-13 141 317 112 291
Probable polygalacturonase At3g15720
PLN02188 PLN02188 3.71e-12 47 264 37 235
polygalacturonase/glycoside hydrolase family protein
PLN03010 PLN03010 6.53e-11 44 315 44 279
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT92652.1 1.22e-263 1 429 1 430
ALJ61789.1 4.94e-263 1 429 1 430
QDO69594.1 1.11e-259 1 429 1 430
QUT77520.1 1.56e-252 1 430 1 431
QJR62619.1 2.00e-244 1 431 1 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 2.11e-33 47 324 45 338
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 6.96e-25 48 324 29 329
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 4.24e-12 48 301 158 444
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.60e-26 40 264 56 279
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q949Z1 4.52e-16 41 316 74 328
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1
P35339 8.32e-15 44 340 38 315
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
P35338 8.32e-15 44 340 38 315
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 8.32e-15 44 382 38 381
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000382 0.998897 0.000206 0.000172 0.000168 0.000152

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003367_00075.