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CAZyme Information: MGYG000003367_00489
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides sp007896885 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp007896885 | |||||||||||
| CAZyme ID | MGYG000003367_00489 | |||||||||||
| CAZy Family | GH55 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 216406; End: 219420 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH55 | 42 | 678 | 2e-87 | 0.8567567567567568 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam12708 | Pectate_lyase_3 | 1.18e-14 | 45 | 217 | 7 | 171 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| pfam12708 | Pectate_lyase_3 | 4.01e-11 | 378 | 431 | 1 | 60 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
| COG3386 | YvrE | 1.01e-10 | 718 | 994 | 17 | 274 | Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]. |
| COG5434 | Pgu1 | 5.12e-10 | 342 | 489 | 44 | 222 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam08450 | SGL | 8.45e-10 | 905 | 993 | 145 | 243 | SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUU00135.1 | 0.0 | 1 | 1004 | 1 | 1005 |
| QPH57852.1 | 0.0 | 1 | 1004 | 1 | 1004 |
| QBJ17509.1 | 0.0 | 1 | 1004 | 1 | 1004 |
| QUT68914.1 | 0.0 | 1 | 1004 | 1 | 1004 |
| BBK89258.1 | 0.0 | 1 | 1004 | 1 | 1004 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5M5Z_A | 5.53e-07 | 43 | 446 | 32 | 459 | ChainA, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.004356 | 0.900568 | 0.094168 | 0.000309 | 0.000279 | 0.000283 |