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CAZyme Information: MGYG000003382_00332
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pantoea agglomerans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea agglomerans | |||||||||||
| CAZyme ID | MGYG000003382_00332 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 143813; End: 144313 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 35 | 132 | 1.1e-18 | 0.6592592592592592 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13400 | LT_IagB-like | 4.89e-44 | 32 | 152 | 1 | 108 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| PRK15328 | PRK15328 | 1.09e-33 | 1 | 162 | 2 | 150 | type III secretion system invasion protein IagB. |
| PRK13722 | PRK13722 | 4.33e-26 | 23 | 156 | 21 | 147 | lytic transglycosylase; Provisional |
| pfam01464 | SLT | 1.49e-25 | 25 | 129 | 1 | 95 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| COG0741 | MltE | 5.13e-16 | 23 | 161 | 141 | 266 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDY44254.1 | 2.55e-116 | 1 | 166 | 1 | 166 |
| QAV47616.1 | 7.31e-116 | 1 | 166 | 1 | 166 |
| QAV52180.1 | 7.31e-116 | 1 | 166 | 1 | 166 |
| QHM74036.1 | 3.56e-86 | 16 | 161 | 56 | 201 |
| QGY32547.1 | 6.20e-76 | 1 | 165 | 1 | 165 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XP8_A | 2.64e-13 | 23 | 112 | 2 | 85 | Structureof EtgA D60N mutant [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E1WAC2 | 3.01e-29 | 15 | 163 | 9 | 151 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
| P0CL15 | 3.01e-29 | 15 | 163 | 9 | 151 | Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1 |
| P43018 | 4.25e-29 | 15 | 163 | 9 | 151 | Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1 |
| P17738 | 4.84e-27 | 23 | 156 | 21 | 147 | X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1 |
| Q00739 | 9.65e-27 | 23 | 156 | 21 | 147 | X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000262 | 0.999088 | 0.000173 | 0.000181 | 0.000153 | 0.000140 |