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CAZyme Information: MGYG000003386_03192

You are here: Home > Sequence: MGYG000003386_03192

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea brenneri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea brenneri
CAZyme ID MGYG000003386_03192
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
209 MGYG000003386_37|CGC6 22896.85 10.121
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003386 4846469 MAG United States North America
Gene Location Start: 514723;  End: 515352  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003386_03192.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 18 172 5.2e-34 0.5194805194805194

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3179 COG3179 2.35e-65 1 209 3 205
Predicted chitinase [General function prediction only].
cd00325 chitinase_GH19 1.85e-10 3 190 2 189
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 6.71e-08 117 166 104 154
Chitinase class I.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARF51912.1 9.16e-113 2 208 1 207
ADZ13641.1 2.33e-110 2 209 1 208
QGU87068.1 2.50e-110 2 208 1 207
ALB54883.1 6.68e-110 2 209 1 208
CBA28929.1 1.91e-109 2 209 1 208

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4OK7_A 1.37e-66 1 208 15 222
ChainA, Endolysin [Salmonella phage SPN1S],4OK7_B Chain B, Endolysin [Salmonella phage SPN1S],4OK7_C Chain C, Endolysin [Salmonella phage SPN1S]
2DKV_A 2.96e-08 117 199 164 269
Crystalstructure of class I chitinase from Oryza sativa L. japonica [Oryza sativa Japonica Group],3IWR_A Crystal structure of class I chitinase from Oryza sativa L. japonica [Oryza sativa Japonica Group],3IWR_B Crystal structure of class I chitinase from Oryza sativa L. japonica [Oryza sativa Japonica Group]
2CJL_A 7.26e-08 3 166 14 138
CrystalStructure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes [Streptomyces coelicolor],2CJL_B Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes [Streptomyces coelicolor]
4MST_A 1.36e-07 117 166 105 155
CrystalStructure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis],4MST_B Crystal Structure of a putative catalytic domain of a chitinase-like protein (HbCLP1) from Hevea brasiliensis [Hevea brasiliensis]
7V91_A 1.88e-07 117 183 108 175
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P44187 1.50e-29 13 197 5 187
Glycosyl hydrolase family 19 domain-containing protein HI_1415 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1415 PE=3 SV=1
O22842 4.99e-09 72 203 134 261
Endochitinase At2g43610 OS=Arabidopsis thaliana OX=3702 GN=At2g43610 PE=1 SV=1
O22841 2.35e-08 72 203 136 263
Endochitinase At2g43620 OS=Arabidopsis thaliana OX=3702 GN=At2g43620 PE=3 SV=1
Q7DNA1 1.76e-07 117 199 195 300
Chitinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht2 PE=1 SV=1
O64203 3.82e-07 113 204 256 357
Endolysin A OS=Mycobacterium phage D29 OX=28369 GN=10 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999436 0.000528 0.000029 0.000004 0.000002 0.000015

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003386_03192.