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CAZyme Information: MGYG000003387_02389

You are here: Home > Sequence: MGYG000003387_02389

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_R sp900766265
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_R; Pseudomonas_R sp900766265
CAZyme ID MGYG000003387_02389
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
385 MGYG000003387_13|CGC2 44022.48 6.0505
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003387 4465621 MAG United States North America
Gene Location Start: 86650;  End: 87807  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003387_02389.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 40 356 2.7e-23 0.8251748251748252

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2723 BglB 1.46e-04 111 334 142 417
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHL73634.1 1.82e-257 1 371 1 371
QXY92682.1 8.32e-256 1 371 1 371
QGZ29232.1 8.32e-256 1 370 1 370
SEH54264.1 1.68e-255 1 375 1 375
QUE76079.1 2.38e-255 1 370 1 370

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999903 0.000110 0.000032 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003387_02389.