logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003389_02490

You are here: Home > Sequence: MGYG000003389_02490

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bdellovibrionota; Bdellovibrionia_A; CAIPTA01; CAIPTA01; ;
CAZyme ID MGYG000003389_02490
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
495 55001.5 5.378
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003389 3878302 MAG United States North America
Gene Location Start: 4991;  End: 6478  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003389_02490.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16683 TGase_elicitor 2.37e-46 110 442 14 340
Transglutaminase elicitor. TGase_elicitor is a family of largely oomycete sequences from plant pathogens that elicit transglutaminase/acyltransferase activity. The enzyme classification is E.C:2.3.2.13. From the presence of sequences from Vibrio spp one can propose a lateral gene transfer event having occurred between bacteria and oomycetes to the probable selective advantage of the pathogen.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASP38465.1 2.02e-143 12 495 7 499
ASU24297.1 3.25e-142 18 489 13 482
QFT26650.1 6.06e-140 17 495 12 489
AYO09518.1 1.33e-138 32 491 23 481
AUV86002.1 5.30e-138 32 491 23 481

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3TW5_A 5.87e-36 110 451 20 351
Crystalstructure of the GP42 transglutaminase from Phytophthora sojae [Phytophthora sojae],3TW5_B Crystal structure of the GP42 transglutaminase from Phytophthora sojae [Phytophthora sojae]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000412 0.998875 0.000219 0.000177 0.000156 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003389_02490.