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CAZyme Information: MGYG000003399_00368

You are here: Home > Sequence: MGYG000003399_00368

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Serratia ureilytica
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Serratia; Serratia ureilytica
CAZyme ID MGYG000003399_00368
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
480 MGYG000003399_2|CGC6 51841.23 5.2698
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003399 5050953 MAG United States North America
Gene Location Start: 335907;  End: 337349  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 25 265 1.5e-23 0.6587837837837838
CBM12 434 467 1.1e-17 0.9705882352941176

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3469 Chi1 2.10e-172 10 327 12 329
Chitinase [Carbohydrate transport and metabolism].
cd02871 GH18_chitinase_D-like 1.57e-98 25 326 1 312
GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
COG3979 COG3979 1.31e-22 338 476 5 143
Chitodextrinase [Carbohydrate transport and metabolism].
cd12214 ChiA1_BD 1.60e-17 435 479 1 45
chitin-binding domain of Chi A1-like proteins. This group contains proteins related to the chitin binding domain of chitinase A1 (ChiA1) of Bacillus circulans WL-12. Glycosidase ChiA1 hydrolyzes chitin and is comprised of several domains: the C-terminal chitin binding domain, an N-terminal and catalytic domain, and 2 fibronectin type III-like domains. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. Bacillus circulans WL-12 ChiA1 facilitates invasion of fungal cell walls. The ChiAi chitin binding domain is required for the specific recognition of insoluble chitin. although topologically and structurally related, ChiA1 lacks the characteristic aromatic residues of Erwinia chrysanthemi endoglucanase Z (CBD(EGZ)).
pfam00704 Glyco_hydro_18 5.45e-13 27 305 2 307
Glycosyl hydrolases family 18.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALD43651.1 0.0 1 480 1 480
AYU89320.1 0.0 1 480 1 480
QDI36940.1 0.0 1 480 1 480
QWU33964.1 0.0 1 480 1 480
SNY82304.1 0.0 1 480 1 480

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4AXN_A 3.62e-232 1 328 1 328
Hallmarksof processive and non-processive glycoside hydrolases revealed from computational and crystallographic studies of the Serratia marcescens chitinases [Serratia marcescens],4AXN_B Hallmarks of processive and non-processive glycoside hydrolases revealed from computational and crystallographic studies of the Serratia marcescens chitinases [Serratia marcescens]
3IAN_A 1.60e-135 25 327 5 310
ChainA, Chitinase [Lactococcus lactis subsp. lactis]
4W5Z_A 3.08e-118 26 333 32 344
Highresolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina. [Moritella marina]
4HMC_A 1.03e-115 26 333 10 322
Crystalstructure of cold-adapted chitinase from Moritella marina [Moritella marina],4HMD_A Crystal structure of cold-adapted chitinase from Moritella marina with a reaction intermediate - oxazolinium ion (NGO) [Moritella marina],4HME_A Crystal structure of cold-adapted chitinase from Moritella marina with a reaction product - NAG2 [Moritella marina]
4MB3_A 2.91e-115 26 333 10 322
Crystalstructure of E153Q mutant of cold-adapted chitinase from Moritella marina [Moritella marina],4MB4_A Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag4 [Moritella marina],4MB5_A Crystal structure of E153Q mutant of cold-adapted chitinase from Moritella complex with Nag5 [Moritella marina]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q838S2 1.80e-133 6 328 23 348
Chitinase OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0361 PE=1 SV=1
P27050 2.65e-31 1 329 166 513
Chitinase D OS=Niallia circulans OX=1397 GN=chiD PE=1 SV=4
P20533 1.41e-22 311 478 521 698
Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1
D4AVJ0 9.21e-20 52 305 17 313
Probable class II chitinase ARB_00204 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00204 PE=1 SV=2
E9F7R6 1.47e-19 25 308 41 333
Endochitinase 4 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) OX=655844 GN=chi4 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999585 0.000449 0.000001 0.000001 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003399_00368.