Species | Stenotrophomonas maltophilia_AM | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia_AM | |||||||||||
CAZyme ID | MGYG000003403_02974 | |||||||||||
CAZy Family | GT83 | |||||||||||
CAZyme Description | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 310787; End: 312508 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT83 | 4 | 532 | 3.2e-101 | 0.9666666666666667 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1807 | ArnT | 3.00e-46 | 11 | 546 | 11 | 530 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
pfam13231 | PMT_2 | 3.71e-13 | 63 | 227 | 1 | 159 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02366 | PMT | 1.91e-07 | 37 | 226 | 34 | 232 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
PRK13279 | arnT | 2.15e-04 | 28 | 194 | 26 | 198 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
COG5305 | COG5305 | 0.006 | 89 | 252 | 122 | 284 | Uncharacterized membrane protein [Function unknown]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QGL94616.1 | 0.0 | 1 | 573 | 1 | 573 |
QPX94942.1 | 0.0 | 1 | 573 | 1 | 573 |
VEE54148.1 | 0.0 | 1 | 573 | 1 | 573 |
ARQ91518.1 | 0.0 | 1 | 573 | 1 | 573 |
AVO32107.1 | 0.0 | 1 | 573 | 1 | 573 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5EZM_A | 2.15e-10 | 12 | 468 | 36 | 483 | CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
C6DAW3 | 1.85e-18 | 8 | 427 | 9 | 424 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=arnT PE=3 SV=1 |
Q2NRV9 | 2.34e-17 | 25 | 426 | 22 | 411 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=arnT2 PE=3 SV=1 |
Q4ZSZ0 | 3.10e-17 | 5 | 409 | 8 | 412 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=arnT PE=3 SV=1 |
Q6D2F3 | 7.38e-17 | 1 | 427 | 5 | 424 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=arnT PE=3 SV=1 |
Q48HY9 | 9.14e-17 | 8 | 409 | 6 | 411 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=arnT PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999902 | 0.000064 | 0.000014 | 0.000000 | 0.000000 | 0.000060 |
start | end |
---|---|
12 | 31 |
79 | 101 |
138 | 157 |
167 | 189 |
210 | 232 |
268 | 290 |
303 | 320 |
325 | 347 |
354 | 376 |
398 | 417 |
424 | 446 |
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