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CAZyme Information: MGYG000003415_00906

You are here: Home > Sequence: MGYG000003415_00906

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900766655
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900766655
CAZyme ID MGYG000003415_00906
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
729 MGYG000003415_237|CGC1 83107.68 6.8108
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003415 1684255 MAG Fiji Oceania
Gene Location Start: 11639;  End: 13828  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003415_00906.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 75 722 6.4e-135 0.9892802450229708

CDD Domains      help

MGYG000003415_00906 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGY53973.1 4.35e-211 49 727 28 686
AXP07840.1 1.19e-209 144 729 109 722
QNN24957.1 1.03e-151 83 726 567 1211
ASV75458.1 3.28e-146 133 726 106 682
QCX40303.1 2.62e-143 8 726 10 701

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z6P_A 5.67e-75 185 725 181 762
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A 6.47e-70 79 725 75 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
4BQ2_A 3.50e-69 211 729 184 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 9.18e-69 211 729 184 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5T3B_A 8.48e-07 217 724 26 475
ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 7.50e-79 239 725 432 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 2.18e-51 223 722 381 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000046 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003415_00906.