Species | Firm-11 sp004556545 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-74; Firm-11; Firm-11 sp004556545 | |||||||||||
CAZyme ID | MGYG000003417_00619 | |||||||||||
CAZy Family | CBM16 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 28688; End: 32872 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT39 | 943 | 1183 | 6e-54 | 0.905829596412556 |
CBM16 | 25 | 149 | 2.6e-16 | 0.9224137931034483 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam16192 | PMT_4TMC | 2.08e-19 | 1193 | 1376 | 1 | 198 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
COG1928 | PMT1 | 1.55e-16 | 945 | 1121 | 50 | 229 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
pfam02366 | PMT | 8.06e-13 | 943 | 1123 | 21 | 204 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
pfam13231 | PMT_2 | 6.42e-08 | 968 | 1121 | 2 | 135 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02018 | CBM_4_9 | 1.69e-07 | 25 | 139 | 2 | 112 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QUC68008.1 | 1.24e-298 | 9 | 1391 | 9 | 1423 |
QTE75201.1 | 1.59e-292 | 10 | 1367 | 14 | 1403 |
QTE71236.1 | 4.04e-292 | 20 | 1367 | 9 | 1388 |
QTE68569.1 | 5.26e-281 | 2 | 1367 | 8 | 1383 |
QUA53848.1 | 4.54e-276 | 11 | 1367 | 20 | 1353 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
L8F4Z2 | 4.72e-23 | 945 | 1367 | 67 | 498 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
P9WN04 | 6.59e-23 | 945 | 1367 | 73 | 504 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
P9WN05 | 6.59e-23 | 945 | 1367 | 73 | 504 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
Q8NRZ6 | 2.68e-15 | 968 | 1369 | 99 | 504 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000227 | 0.999033 | 0.000228 | 0.000164 | 0.000160 | 0.000154 |
start | end |
---|---|
5 | 22 |
212 | 234 |
241 | 260 |
301 | 323 |
328 | 350 |
355 | 377 |
384 | 398 |
408 | 430 |
443 | 465 |
511 | 533 |
554 | 571 |
576 | 595 |
602 | 619 |
624 | 638 |
645 | 667 |
682 | 704 |
759 | 781 |
988 | 1007 |
1038 | 1060 |
1098 | 1120 |
1157 | 1179 |
1254 | 1271 |
1291 | 1310 |
1314 | 1333 |
1346 | 1368 |
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