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CAZyme Information: MGYG000003420_01571

You are here: Home > Sequence: MGYG000003420_01571

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA4372 sp900766785
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; UBA4372; UBA4372 sp900766785
CAZyme ID MGYG000003420_01571
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
791 89619.12 6.5054
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003420 2267758 MAG Fiji Oceania
Gene Location Start: 13591;  End: 15966  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003420_01571.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 226 726 3.1e-58 0.9960238568588469

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 2.87e-64 226 726 2 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 1.50e-35 204 739 1 516
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam00754 F5_F8_type_C 8.04e-09 54 147 28 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 5.20e-04 54 146 39 129
Substituted updates: Jan 31, 2002
pfam01532 Glyco_hydro_47 0.004 392 475 305 385
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23996.1 2.29e-223 25 784 18 802
AXC12824.1 7.69e-200 11 784 18 817
VEH16333.1 1.36e-114 133 784 266 916
QEH36139.1 4.24e-39 219 779 51 620
QIP14261.1 1.71e-38 226 780 59 649

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 4.09e-20 467 781 295 645
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 2.14e-19 467 781 295 645
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
6EX6_A 2.19e-19 291 727 78 546
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A 1.07e-17 283 736 77 570
Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A 1.87e-17 283 736 77 570
Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004300 0.775663 0.218620 0.000599 0.000393 0.000384

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003420_01571.