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CAZyme Information: MGYG000003449_00220
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-312 sp002405555 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp002405555 | |||||||||||
| CAZyme ID | MGYG000003449_00220 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Anti-sigma-I factor RsgI6 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 109744; End: 111186 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 95 | 419 | 6.4e-40 | 0.9570957095709571 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 1.41e-32 | 136 | 420 | 3 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.05e-26 | 136 | 394 | 69 | 305 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam00331 | Glyco_hydro_10 | 1.18e-21 | 136 | 418 | 46 | 306 | Glycosyl hydrolase family 10. |
| cd19608 | GH113_mannanase-like | 0.001 | 301 | 422 | 178 | 308 | Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMW04636.1 | 1.79e-131 | 33 | 480 | 11 | 458 |
| QNL52536.1 | 3.45e-120 | 45 | 460 | 16 | 418 |
| AEI51978.1 | 6.58e-108 | 49 | 478 | 24 | 440 |
| QHV94149.1 | 2.04e-107 | 44 | 450 | 19 | 416 |
| QIP12711.1 | 4.07e-107 | 44 | 450 | 19 | 416 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D88_A | 1.18e-17 | 64 | 466 | 52 | 409 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 7D89_A | 2.89e-16 | 64 | 466 | 52 | 409 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 6FHE_A | 9.56e-14 | 150 | 417 | 56 | 335 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
| 1VBR_A | 5.05e-13 | 170 | 427 | 72 | 323 | Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima] |
| 3NIY_A | 1.80e-12 | 170 | 427 | 88 | 339 | Crystalstructure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NIY_B Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NJ3_A Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1],3NJ3_B Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q60041 | 3.26e-11 | 170 | 427 | 91 | 342 | Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1 |
| P07986 | 1.75e-10 | 167 | 417 | 105 | 346 | Exoglucanase/xylanase OS=Cellulomonas fimi OX=1708 GN=cex PE=1 SV=1 |
| P10474 | 6.33e-10 | 161 | 417 | 102 | 366 | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1 |
| I1S3C6 | 9.33e-10 | 167 | 425 | 141 | 381 | Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1 |
| P79046 | 1.95e-09 | 167 | 424 | 85 | 337 | Endo-1,4-beta-xylanase 1 OS=Humicola grisea var. thermoidea OX=5528 GN=xyn1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000238 | 0.999129 | 0.000156 | 0.000175 | 0.000153 | 0.000140 |