logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003449_00273

You are here: Home > Sequence: MGYG000003449_00273

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp002405555
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp002405555
CAZyme ID MGYG000003449_00273
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1200 MGYG000003449_2|CGC1 132914.63 8.3703
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003449 2395522 MAG Fiji Oceania
Gene Location Start: 178858;  End: 182460  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.40

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 306 878 1.9e-138 0.7220873786407767

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 33 844 1 868
alpha-L-rhamnosidase.
pfam11875 DUF3395 0.001 897 960 55 138
Domain of unknown function (DUF3395). This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 147 to 176 amino acids in length. This domain is found associated with pfam00226.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG54195.1 1.13e-310 27 1192 35 1130
BAR50760.1 2.23e-282 21 1194 24 1123
AEW21098.1 1.14e-281 21 1194 21 1120
BAR48037.1 9.95e-281 21 1194 24 1123
AVM45203.1 3.68e-276 26 1187 22 1266

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 2.63e-117 27 1135 41 1105
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 1.73e-107 2 1134 5 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 4.49e-107 2 1134 5 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6MVF_A 2.71e-06 1000 1126 11 140
Crystalstructure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_B Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_C Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_D Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_E Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_F Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 5.71e-166 5 1187 7 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000218 0.999142 0.000160 0.000169 0.000147 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003449_00273.