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CAZyme Information: MGYG000003450_01336

You are here: Home > Sequence: MGYG000003450_01336

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1740 sp900767415
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UBA1740; UBA1740 sp900767415
CAZyme ID MGYG000003450_01336
CAZy Family PL12
CAZyme Description Heparin-sulfate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
655 MGYG000003450_48|CGC1 75425.84 5.4312
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003450 1925108 MAG Fiji Oceania
Gene Location Start: 2826;  End: 4793  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003450_01336.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 367 502 9.6e-30 0.9420289855072463

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16889 Hepar_II_III_N 3.67e-73 11 346 2 344
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
pfam07940 Hepar_II_III 9.33e-24 356 561 1 205
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM68796.1 2.53e-123 8 539 20 554
AHF90891.1 1.88e-93 70 611 109 660
AHF90266.1 3.37e-86 13 622 49 669
AHF92618.1 3.39e-84 18 618 95 709
AVM45511.1 1.41e-75 28 611 60 635

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JMD_A 2.13e-48 12 444 21 474
HeparinaseIII-BT4657 gene product, Methylated Lysines [Bacteroides thetaiotaomicron VPI-5482]
5JMF_A 4.94e-45 12 441 21 471
HeparinaseIII-BT4657 gene product [Bacteroides thetaiotaomicron VPI-5482]
4MMH_A 3.91e-39 88 626 91 610
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 3.91e-39 88 626 91 610
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]
4FNV_A 3.39e-29 11 514 51 565
CrystalStructure of Heparinase III [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C7EXL6 3.85e-48 12 537 32 554
Heparin-sulfate lyase OS=Bacteroides stercoris OX=46506 GN=hepC PE=1 SV=1
Q59289 2.45e-38 88 626 115 634
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1
Q89YR9 1.86e-28 11 514 51 565
Heparin-sulfate lyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003450_01336.