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CAZyme Information: MGYG000003456_02054

You are here: Home > Sequence: MGYG000003456_02054

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1865 sp900547725
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UMGS1865; UMGS1865 sp900547725
CAZyme ID MGYG000003456_02054
CAZy Family GH23
CAZyme Description DNA mismatch repair protein MutS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2553 285867.77 4.7874
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003456 2491093 MAG Fiji Oceania
Gene Location Start: 41637;  End: 49298  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003456_02054.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 3.29e-84 1259 1785 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 3.96e-30 1926 2117 439 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
pfam01624 MutS_I 1.95e-26 703 794 3 90
MutS domain I. This domain is found in proteins of the MutS family (DNA mismatch repair proteins) and is found associated with pfam00488, pfam05188, pfam05192 and pfam05190. The MutS family of proteins is named after the Salmonella typhimurium MutS protein involved in mismatch repair; other members of the family included the eukaryotic MSH 1,2,3, 4,5 and 6 proteins. These have various roles in DNA repair and recombination. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein. The aligned region corresponds with globular domain I, which is involved in DNA binding, in Thermus aquaticus MutS as characterized in.
PRK05399 PRK05399 4.35e-23 707 786 15 93
DNA mismatch repair protein MutS; Provisional
TIGR01070 mutS1 3.25e-19 703 785 4 86
DNA mismatch repair protein MutS. [DNA metabolism, DNA replication, recombination, and repair]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 1.16e-318 982 2523 1563 3190
QIW86704.1 4.09e-316 982 2530 1631 3265
QIW86628.1 4.09e-316 982 2530 1631 3265
AXF51455.1 1.74e-309 982 2533 1797 3437
AEY69616.1 2.57e-309 982 2533 1704 3344

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1OH5_A 1.85e-13 703 785 13 95
THECRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A C:A MISMATCH [Escherichia coli],1OH5_B THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A C:A MISMATCH [Escherichia coli],1OH6_A THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN A:A MISMATCH [Escherichia coli],1OH6_B THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN A:A MISMATCH [Escherichia coli],1OH7_A THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A G:G MISMATCH [Escherichia coli],1OH7_B THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A G:G MISMATCH [Escherichia coli],1OH8_A THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN UNPAIRED THYMIDINE [Escherichia coli],1OH8_B THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH AN UNPAIRED THYMIDINE [Escherichia coli],1W7A_A ATP bound MutS [Escherichia coli],1W7A_B ATP bound MutS [Escherichia coli],2WTU_A Crystal structure of Escherichia coli MutS in complex with a 16 basepair oligo containing an A.A mismatch. [Escherichia coli],2WTU_B Crystal structure of Escherichia coli MutS in complex with a 16 basepair oligo containing an A.A mismatch. [Escherichia coli],3ZLJ_A CRYSTAL STRUCTURE OF FULL-LENGTH E.COLI DNA MISMATCH REPAIR PROTEIN MUTS D835R MUTANT IN COMPLEX WITH GT MISMATCHED DNA [Escherichia coli K-12],3ZLJ_B CRYSTAL STRUCTURE OF FULL-LENGTH E.COLI DNA MISMATCH REPAIR PROTEIN MUTS D835R MUTANT IN COMPLEX WITH GT MISMATCHED DNA [Escherichia coli K-12]
3K0S_A 1.85e-13 703 785 12 94
ChainA, DNA mismatch repair protein mutS [Escherichia coli K-12],3K0S_B Chain B, DNA mismatch repair protein mutS [Escherichia coli K-12]
5AKB_A 1.85e-13 703 785 13 95
MutSin complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKB_B MutS in complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKB_E MutS in complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKC_A MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_B MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_E MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_F MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_I MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_J MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKD_A MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_B MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_E MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_F MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_I MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_J MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12]
1NG9_A 1.85e-13 703 785 13 95
ChainA, DNA mismatch repair protein MutS [Escherichia coli],1NG9_B Chain B, DNA mismatch repair protein MutS [Escherichia coli]
7OTO_A 1.86e-13 703 785 19 101
ChainA, DNA mismatch repair protein MutS [Escherichia coli K-12],7OTO_B Chain B, DNA mismatch repair protein MutS [Escherichia coli K-12],7OU0_A Chain A, DNA mismatch repair protein MutS [Escherichia coli K-12],7OU0_B Chain B, DNA mismatch repair protein MutS [Escherichia coli K-12],7OU4_A Chain A, DNA mismatch repair protein MutS [Escherichia coli],7OU4_B Chain B, DNA mismatch repair protein MutS [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.86e-35 984 2344 49 1607
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1
Q6FC54 8.07e-17 703 785 16 98
DNA mismatch repair protein MutS OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=mutS PE=3 SV=1
Q11B27 4.12e-16 703 794 1 92
DNA mismatch repair protein MutS OS=Chelativorans sp. (strain BNC1) OX=266779 GN=mutS PE=3 SV=1
Q07V29 1.25e-15 680 785 2 108
DNA mismatch repair protein MutS OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=mutS PE=3 SV=1
Q6G0X1 1.25e-15 703 794 29 120
DNA mismatch repair protein MutS OS=Bartonella quintana (strain Toulouse) OX=283165 GN=mutS PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003456_02054.