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CAZyme Information: MGYG000003473_00105
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA6857 sp900768075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA6857; UBA6857 sp900768075 | |||||||||||
| CAZyme ID | MGYG000003473_00105 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1928; End: 3283 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 29 | 389 | 1e-70 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 9.04e-60 | 4 | 294 | 83 | 393 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.85e-18 | 99 | 374 | 49 | 312 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 5.52e-16 | 5 | 364 | 25 | 357 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 2.71e-14 | 2 | 371 | 45 | 381 | polygalacturonase |
| PLN02188 | PLN02188 | 3.82e-14 | 3 | 366 | 36 | 376 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXB29249.1 | 1.76e-157 | 3 | 450 | 2 | 456 |
| CBL02678.1 | 2.49e-157 | 3 | 450 | 2 | 456 |
| ANU45921.1 | 6.37e-155 | 4 | 450 | 3 | 451 |
| QQQ99325.1 | 6.37e-155 | 4 | 450 | 3 | 451 |
| QIX90756.1 | 3.64e-154 | 4 | 450 | 3 | 451 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 4.51e-23 | 4 | 254 | 45 | 312 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.01e-19 | 5 | 254 | 29 | 304 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 4MXN_A | 1.34e-13 | 2 | 240 | 20 | 235 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 2UVE_A | 8.28e-12 | 2 | 225 | 155 | 412 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 3ZPP_A | 7.03e-08 | 1 | 185 | 21 | 194 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 7.07e-26 | 8 | 254 | 67 | 314 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q9LW07 | 4.83e-14 | 5 | 253 | 25 | 270 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P27644 | 6.55e-13 | 160 | 254 | 39 | 138 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q8RY29 | 4.09e-09 | 5 | 228 | 69 | 277 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| Q9FY19 | 4.75e-09 | 3 | 226 | 59 | 267 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000036 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |