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CAZyme Information: MGYG000003483_00498

You are here: Home > Sequence: MGYG000003483_00498

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900547945
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900547945
CAZyme ID MGYG000003483_00498
CAZy Family GH105
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1176 131103.55 8.0544
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003483 3685575 MAG Fiji Oceania
Gene Location Start: 8008;  End: 11538  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003483_00498.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 74 396 1.1e-65 0.9457831325301205

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16153 DUF4861 2.70e-52 818 1173 1 382
Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding.
pfam07470 Glyco_hydro_88 4.69e-46 40 393 1 334
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 4.40e-33 178 392 122 347
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHF15539.1 7.42e-114 26 400 26 376
AEW01626.1 4.75e-112 17 399 21 380
SDR67342.1 7.31e-112 15 399 15 383
QJB39988.1 1.68e-111 29 399 31 377
QJB33470.1 1.68e-111 29 399 31 377

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K11_A 2.85e-28 179 393 189 405
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
5NOA_A 1.84e-20 190 346 158 321
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4CE7_A 1.44e-15 246 349 222 323
Crystalstructure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_B Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_C Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans]
1NC5_A 2.68e-14 178 387 130 353
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
4Q88_A 1.01e-13 190 346 141 304
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KN67 8.52e-41 814 1176 27 395
Uncharacterized protein P7 OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21960 PE=3 SV=2
T2KPL9 1.48e-15 118 349 96 329
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4 8.46e-15 246 349 229 330
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
O34559 1.47e-13 178 387 130 353
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P9WF04 2.38e-10 53 349 79 365
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002138 0.997011 0.000237 0.000206 0.000192 0.000201

TMHMM  Annotations      download full data without filtering help

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