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CAZyme Information: MGYG000003483_01979

You are here: Home > Sequence: MGYG000003483_01979

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900547945
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900547945
CAZyme ID MGYG000003483_01979
CAZy Family GH156
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1416 MGYG000003483_104|CGC1 154254.32 8.3061
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003483 3685575 MAG Fiji Oceania
Gene Location Start: 16647;  End: 20897  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003483_01979.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH156 255 742 4.6e-96 0.9184782608695652
GH141 751 1248 4.5e-67 0.9867172675521821

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0800 Eda 1.60e-52 19 230 2 207
2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism].
cd00452 KDPG_aldolase 5.09e-49 27 223 1 189
KDPG and KHG aldolase. KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
TIGR01182 eda 1.34e-38 28 230 6 202
Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida [Amino acid biosynthesis, Glutamate family, Energy metabolism, Entner-Doudoroff]
PRK07455 PRK07455 1.44e-35 27 196 9 172
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase.
PRK09140 PRK09140 9.04e-34 33 196 13 171
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEG41703.1 5.14e-114 764 1411 30 656
QDT89988.1 2.98e-106 748 1411 27 657
QDT78441.1 2.98e-106 748 1411 27 657
QDU14037.1 2.01e-105 748 1411 27 657
QEG16006.1 7.14e-105 748 1411 27 657

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6RZD_A 4.26e-64 259 536 7 295
Crystalstructure of an inverting family GH156 exosialidase from uncultured bacterium pG7 [uncultured bacterium pG7],6RZD_B Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 [uncultured bacterium pG7],6S00_A Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-acetylneuraminic acid [uncultured bacterium pG7],6S00_B Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-acetylneuraminic acid [uncultured bacterium pG7],6S0E_A Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-Acetyl-2,3-dehydro-2-deoxyneuraminic acid [uncultured bacterium pG7],6S0E_B Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-Acetyl-2,3-dehydro-2-deoxyneuraminic acid [uncultured bacterium pG7],6S0F_A Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with 3-Deoxy-D-glycero-D-galacto-2-nonulosonic acid [uncultured bacterium pG7],6S0F_B Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with 3-Deoxy-D-glycero-D-galacto-2-nonulosonic acid [uncultured bacterium pG7]
6S04_A 1.84e-61 259 536 7 295
Crystalstructure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-glycolylneuraminic acid [uncultured bacterium pG7],6S04_B Crystal structure of an inverting family GH156 exosialidase from uncultured bacterium pG7 in complex with N-glycolylneuraminic acid [uncultured bacterium pG7]
2V81_A 1.20e-24 33 207 10 179
NativeKDPGal structure [Escherichia coli],2V82_A KDPGal complexed to KDPGal [Escherichia coli]
4QCC_A 2.98e-24 33 207 10 179
Structureof a cube-shaped, highly porous protein cage designed by fusing symmetric oligomeric domains [Escherichia coli],4QCC_B Structure of a cube-shaped, highly porous protein cage designed by fusing symmetric oligomeric domains [Escherichia coli]
1WA3_A 1.17e-23 28 233 8 201
Mechanismof the Class I KDPG aldolase [Thermotoga maritima],1WA3_B Mechanism of the Class I KDPG aldolase [Thermotoga maritima],1WA3_C Mechanism of the Class I KDPG aldolase [Thermotoga maritima],1WA3_D Mechanism of the Class I KDPG aldolase [Thermotoga maritima],1WA3_E Mechanism of the Class I KDPG aldolase [Thermotoga maritima],1WA3_F Mechanism of the Class I KDPG aldolase [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q92RN8 1.20e-25 29 207 10 183
Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=dgoA PE=3 SV=1
Q6BF16 2.17e-24 33 207 10 179
2-dehydro-3-deoxy-6-phosphogalactonate aldolase OS=Escherichia coli (strain K12) OX=83333 GN=dgoA PE=1 SV=1
P50846 1.29e-16 23 207 6 182
KHG/KDPG aldolase OS=Bacillus subtilis (strain 168) OX=224308 GN=kdgA PE=2 SV=1
O83578 1.11e-15 23 189 4 164
Putative KHG/KDPG aldolase OS=Treponema pallidum (strain Nichols) OX=243276 GN=eda PE=3 SV=1
P44480 2.89e-15 19 194 4 173
Putative KHG/KDPG aldolase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=eda PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000079 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003483_01979.