Species | Ruminiclostridium_E sp900768735 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminiclostridium_E; Ruminiclostridium_E sp900768735 | |||||||||||
CAZyme ID | MGYG000003494_01201 | |||||||||||
CAZy Family | GH5 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 7873; End: 9075 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH5 | 64 | 354 | 1.1e-44 | 0.9901639344262295 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd21510 | agarase_cat | 0.009 | 181 | 289 | 77 | 187 | alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases identified in non-marine organisms. Typically, agarases (E.C. 3.2.1.81) are found in ocean-dwelling bacteria since agarose is a principle component of red algae cell wall polysaccharides. Agarose is a linear polymer of alternating D-galactose and 3,6-anhydro-L-galactopyranose. Endo-acting agarases, such as glycoside hydrolase 16 (GH16) and GH86 hydrolyze internal beta-1,4 linkages. GH86-like endo-acting agarase of this protein family has been identified in the human intestinal bacterium Bacteroides uniformis. This acquired metabolic pathway, as demonstrated by the prevalence of agar-specific genetic cluster called polysaccharide utilization loci (PULs), varies considerably between human populations, being much more prevalent in a Japanese sample than in North America, European, or Chinese samples. Agarase activity was also identified in the non-marine bacterium Cellvibrio sp. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CBL16471.1 | 8.75e-117 | 13 | 382 | 6 | 361 |
CCO03823.1 | 7.34e-109 | 6 | 382 | 3 | 396 |
ADD61974.1 | 5.20e-103 | 6 | 382 | 3 | 405 |
ADU21807.1 | 6.91e-95 | 49 | 382 | 72 | 407 |
QHW32544.1 | 2.06e-93 | 51 | 358 | 36 | 344 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000000 | 0.000002 | 1.000042 | 0.000000 | 0.000000 | 0.000000 |
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