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CAZyme Information: MGYG000003500_00555

You are here: Home > Sequence: MGYG000003500_00555

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Butyrivibrio_A sp900768755
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Butyrivibrio_A; Butyrivibrio_A sp900768755
CAZyme ID MGYG000003500_00555
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
614 MGYG000003500_17|CGC1 69484.77 4.1229
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003500 2005892 MAG Fiji Oceania
Gene Location Start: 6223;  End: 8067  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003500_00555.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 339 604 6.7e-36 0.7905405405405406

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 8.95e-74 305 608 8 311
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 1.03e-46 289 608 95 416
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 1.91e-28 303 607 4 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 1.04e-23 374 601 72 306
Glycosyl hydrolases family 18.
smart00636 Glyco_18 2.09e-21 374 597 75 329
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ96722.1 8.65e-122 59 609 14 562
BCN32821.1 3.32e-121 48 609 2 560
QHQ60083.1 7.29e-118 116 609 7 497
QRO36968.1 7.46e-117 44 609 94 672
QBF73663.1 7.46e-117 44 609 94 672

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 5.44e-21 386 599 95 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3J_A 2.83e-16 337 607 146 418
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
5JH8_A 1.91e-15 384 607 86 307
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
4S3K_A 6.55e-14 378 607 188 420
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
6JM7_A 1.54e-10 374 599 84 347
Crystalstructure of Ostrinia furnacalis Group IV chitinase [Ostrinia furnacalis],6JMB_A Chain A, ofchtiv-allosamidin [Ostrinia furnacalis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 3.14e-20 386 599 187 400
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
O32258 3.69e-18 358 607 86 336
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P0DPJ9 1.13e-14 337 607 145 417
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999871 0.000143 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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