logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003501_00893

You are here: Home > Sequence: MGYG000003501_00893

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA7001 sp900768805
Lineage Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-508; UBA7001; UBA7001 sp900768805
CAZyme ID MGYG000003501_00893
CAZy Family GT2
CAZyme Description Tyrocidine synthase 3
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2470 MGYG000003501_126|CGC1 284821.96 6.7966
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003501 2158154 MAG Fiji Oceania
Gene Location Start: 10679;  End: 18091  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003501_00893.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12467 PRK12467 0.0 40 2055 84 2160
peptide synthase; Provisional
PRK12316 PRK12316 0.0 1046 2054 53 1080
peptide synthase; Provisional
PRK12316 PRK12316 0.0 385 2054 1931 3618
peptide synthase; Provisional
cd12117 A_NRPS_Srf_like 0.0 460 937 1 483
The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions. This family includes the adenylation domain of the Bacillus subtilis termination module (Surfactin domain, SrfA-C) which recognizes a specific amino acid building block, which is then activated and transferred to the terminal thiol of the 4'-phosphopantetheine (Ppan) arm of the downstream peptidyl carrier protein (PCP) domain.
PRK12467 PRK12467 0.0 1046 2026 53 1064
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 2.53e-225 259 2058 812 2662
BAY90071.1 2.27e-148 953 2054 2133 3279
BAZ00088.1 1.21e-147 953 2054 2142 3288
BAZ75991.1 1.21e-147 953 2054 2142 3288
BAY30132.1 8.48e-147 953 2054 2144 3290

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 8.58e-259 453 2072 202 1811
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 3.26e-243 453 1977 202 1715
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
5U89_A 9.19e-151 433 1473 2 1071
Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1]
6MFW_A 4.78e-147 453 1468 202 1205
Crystalstructure of a 4-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis]
6MFX_A 7.39e-146 453 1468 202 1205
Crystalstructure of a 4-domain construct of a mutant of LgrA in the substrate donation state [Brevibacillus parabrevis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C063 0.0 2 2058 1058 3123
Gramicidin S synthase 2 OS=Aneurinibacillus migulanus OX=47500 GN=grsB PE=3 SV=2
P27206 0.0 1 2060 1 2083
Surfactin synthase subunit 1 OS=Bacillus subtilis (strain 168) OX=224308 GN=srfAA PE=1 SV=4
P0C064 0.0 2 2058 1058 3122
Gramicidin S synthase 2 OS=Brevibacillus brevis OX=1393 GN=grsB PE=1 SV=2
O68008 0.0 40 2054 43 2059
Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
O30409 0.0 3 2054 3128 5186
Tyrocidine synthase 3 OS=Brevibacillus parabrevis OX=54914 GN=tycC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000007 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003501_00893.