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CAZyme Information: MGYG000003514_00845

You are here: Home > Sequence: MGYG000003514_00845

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fibrobacter_A intestinalis
Lineage Bacteria; Fibrobacterota; Fibrobacteria; Fibrobacterales; Fibrobacteraceae; Fibrobacter_A; Fibrobacter_A intestinalis
CAZyme ID MGYG000003514_00845
CAZy Family GH16
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
350 MGYG000003514_35|CGC1 39607.15 4.8976
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003514 2933446 MAG Fiji Oceania
Gene Location Start: 1393;  End: 2445  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003514_00845.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH16 22 190 6.5e-64 0.9938650306748467

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02175 GH16_lichenase 7.80e-35 20 194 53 212
lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.
cd00413 Glyco_hydrolase_16 1.20e-31 22 190 53 210
glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.
pfam00722 Glyco_hydro_16 3.73e-28 18 162 16 150
Glycosyl hydrolases family 16.
COG2273 BglS 1.57e-24 21 194 102 267
Beta-glucanase, GH16 family [Carbohydrate transport and metabolism].
cd02183 GH16_fungal_CRH1_transglycosylase 1.51e-22 19 162 31 164
glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR92633.1 6.09e-113 7 277 13 275
ACR92632.1 7.14e-112 19 277 4 254
ACR92637.1 9.73e-112 19 277 4 254
ACR92630.1 1.49e-111 19 266 4 244
ADL24776.1 3.97e-111 11 266 19 267

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3AXD_A 4.59e-112 20 266 5 244
Thetruncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in apo-form [Fibrobacter succinogenes subsp. succinogenes S85],3AXD_B The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in apo-form [Fibrobacter succinogenes subsp. succinogenes S85],3AXE_A The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed) [Fibrobacter succinogenes subsp. succinogenes S85]
3HR9_A 6.99e-112 19 265 2 241
ChainA, Beta-glucanase [Fibrobacter succinogenes]
2R49_A 1.41e-111 19 265 2 241
ChainA, Beta-glucanase [Fibrobacter succinogenes]
3H0O_A 2.73e-111 19 265 1 240
ChainA, Beta-glucanase [Fibrobacter succinogenes]
1ZM1_A 2.30e-110 19 266 1 241
Crystalstructures of complex F. succinogenes 1,3-1,4-beta-D-glucanase and beta-1,3-1,4-cellotriose [Fibrobacter succinogenes],1ZM1_B Crystal structures of complex F. succinogenes 1,3-1,4-beta-D-glucanase and beta-1,3-1,4-cellotriose [Fibrobacter succinogenes]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P17989 7.95e-112 11 266 19 267
Beta-glucanase OS=Fibrobacter succinogenes (strain ATCC 19169 / S85) OX=59374 GN=Fisuc_2961 PE=1 SV=1
P37073 2.51e-25 7 194 79 251
Beta-glucanase OS=Brevibacillus brevis OX=1393 GN=bglBB PE=1 SV=1
Q53317 1.19e-21 18 187 630 784
Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2
P04957 1.12e-20 12 188 77 238
Beta-glucanase OS=Bacillus subtilis (strain 168) OX=224308 GN=bglS PE=1 SV=2
Q84C00 4.88e-20 22 190 90 243
Beta-glucanase OS=Acetivibrio thermocellus OX=1515 GN=licB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000269 0.999030 0.000207 0.000178 0.000166 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003514_00845.