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CAZyme Information: MGYG000003514_01457
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fibrobacter_A intestinalis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Fibrobacterota; Fibrobacteria; Fibrobacterales; Fibrobacteraceae; Fibrobacter_A; Fibrobacter_A intestinalis | |||||||||||
| CAZyme ID | MGYG000003514_01457 | |||||||||||
| CAZy Family | GH30 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 18772; End: 20256 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH30 | 33 | 249 | 7.8e-25 | 0.4172661870503597 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5520 | XynC | 8.46e-08 | 35 | 251 | 237 | 430 | O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| pfam17189 | Glyco_hydro_30C | 1.20e-04 | 167 | 247 | 4 | 63 | Glycosyl hydrolase family 30 beta sandwich domain. |
| TIGR04183 | Por_Secre_tail | 0.004 | 446 | 494 | 24 | 68 | Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification. |
| pfam18962 | Por_Secre_tail | 0.006 | 446 | 494 | 22 | 69 | Secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber have on average twenty or more copies of this C-terminal domain, associated with sorting to the outer membrane and covalent modification. This domain targets proteins to type IX secretion systems and is secreted then cleaved off by a C-terminal signal peptidease. Based on similarity to other families it is likely that this domain adopts an immunoglobulin like fold. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACX75836.1 | 5.06e-160 | 2 | 494 | 209 | 714 |
| ADL24763.1 | 5.06e-160 | 2 | 494 | 209 | 714 |
| QDM11115.1 | 1.03e-25 | 4 | 197 | 237 | 438 |
| QUT78592.1 | 1.03e-25 | 4 | 197 | 237 | 438 |
| ALJ48342.1 | 4.65e-25 | 4 | 197 | 237 | 438 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |