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CAZyme Information: MGYG000003525_00402
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RC9 sp004556005 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp004556005 | |||||||||||
| CAZyme ID | MGYG000003525_00402 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 79690; End: 81624 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 217 | 416 | 2e-78 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 1.18e-09 | 177 | 362 | 48 | 236 | Pectate lyase [Carbohydrate transport and metabolism]. |
| cd00063 | FN3 | 2.24e-06 | 43 | 127 | 1 | 93 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| smart00656 | Amb_all | 1.06e-05 | 211 | 392 | 3 | 168 | Amb_all domain. |
| smart00060 | FN3 | 0.009 | 43 | 117 | 1 | 83 | Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK63670.1 | 7.34e-177 | 35 | 644 | 9 | 606 |
| AHW58605.1 | 2.25e-125 | 149 | 638 | 22 | 484 |
| CBK68207.1 | 7.82e-122 | 166 | 638 | 49 | 544 |
| QUT32882.1 | 7.82e-122 | 166 | 638 | 49 | 544 |
| QUR41793.1 | 7.82e-122 | 166 | 638 | 49 | 544 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8NQQ7 | 2.89e-36 | 166 | 627 | 22 | 414 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 7.34e-36 | 166 | 627 | 22 | 414 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| Q2UB83 | 1.62e-34 | 166 | 627 | 22 | 414 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| A1DPF0 | 4.17e-34 | 166 | 627 | 23 | 415 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
| Q5B297 | 4.24e-34 | 155 | 629 | 11 | 413 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000541 | 0.167497 | 0.831519 | 0.000136 | 0.000186 | 0.000111 |